Multiple Sequence Alignment
===========================

.. currentmodule:: pytrimal


Alignments
^^^^^^^^^^

Alignment
---------

.. autoclass:: pytrimal.Alignment
   :special-members: __init__
   :members:


Trimmed Alignment
-----------------

.. autoclass:: pytrimal.TrimmedAlignment(Alignment)
   :special-members: __init__
   :members:


Attributes
^^^^^^^^^^

AlignmentSequences
------------------

.. autoclass:: pytrimal.AlignmentSequences


AlignmentResidues
-----------------

.. autoclass:: pytrimal.AlignmentResidues